Variant Detail

RSID rs529565
HGVS NC_000009.11:g.136149500T>C
Chromosome 9
Start position133274084
Stop position133274084
Associated gene(s)ABO
Mutation typeTagged SNP
Reference T
Alternative A/G/T
Associated allele C
Associated African Allele Frequency 0.3937
Consequence Intronic
Other population frequencies linkALFA rs529565

Variants

NamePaperDescription of ComparisonGeneRSIDAssociationDisease StatusMAFStatistical Odds RatioStatistical P-value
Namkoong_rs529565 Japan COVID-19 Task Force: a nation-wide consortium to elucidate host genetics of COVID-19 pandemic in Japan Severe COVID-19 vs control ABO rs529565 Positive Severe 0.494 1.18 0.0028
Namkoong_rs529565 Japan COVID-19 Task Force: a nation-wide consortium to elucidate host genetics of COVID-19 pandemic in Japan Young severe COVID-19 vs cntrl ABO rs529565 Positive Severe 0.51 1.22 0.012
COVID-19 HGI_rs529565 Mapping the human genetic architecture of COVID-19 Susceptibility vs Control ABO rs529565 Negative Susceptibility 0.651 0.905 0.00000000000000000000000000000000000000145

Papers

Paper
Japan COVID-19 Task Force: a nation-wide consortium to elucidate host genetics of COVID-19 pandemic in Japan
Mapping the human genetic architecture of COVID-19