Variant Detail

RSID rs11385942
HGVS NC_000003.11:g.45876460_45876461=
Chromosome 3
Start position45876460
Stop position45876461
Associated gene(s)LZTFL1, SLC6A20, CCR9, FYCO1, CXCR6, XCR1, CCR1, CCR3
Mutation typeTagged SNP
Reference G (A)
Alternative GA (AA)
Associated allele GA
Associated African Allele Frequency -, 0.059
Consequence Intronic
Other population frequencies linkALFA rs11385942

Variants

NamePaperDescription of ComparisonGeneRSIDAssociationDisease StatusMAFStatistical Odds RatioStatistical P-value
Ellinghaus_rs11385942 Genomewide association study of severe Covid-19 with respiratory failure Meta severity vs control LZTFL1,FYCO1,CXCR6,CCR2,CCR3,CCR9,SLC6A20,XCR1 rs11385942 Positive Severe None 1.77 0.000000000115
Roberts_rs11385942 AncestryDNA COVID-19 Host Genetic Study Identifies Three Novel Loci Meta Analysis LZTFL1, SLC6A20, CCR9, FYCO1, CXCR6, XCR1, CCR2, CCR3 rs11385942 Positive Severe 0.08 1.43 0.02

Papers

Paper
Genomewide association study of severe Covid-19 with respiratory failure
AncestryDNA COVID-19 Host Genetic Study Identifies Three Novel Loci