Variant Detail

RSID rs13078854
HGVS NC_000003.12:g.45820440G>A
Chromosome 3
Start position45820440
Stop position45820440
Associated gene(s)LOC107986083,LZTFL1, SLC6A20, CCR9, FYCO1, CXCR6, XCR1
Mutation typeTagged SNP
Reference G
Alternative A
Associated allele A
Associated African Allele Frequency 0.0143
Consequence Intronic
Other population frequencies linkALFA rs13078854

Variants

NamePaperDescription of ComparisonGeneRSIDAssociationDisease StatusMAFStatistical Odds RatioStatistical P-value
Shelton_rs13078854 Trans-ancestry analysis reveals genetic and non-genetic associations with COVID-19 susceptibility and severity COVID-19 severity vs controls LOC107986083, LZTFL1,SLC6A20, CCR9, FYCO1, CXCR6, XCR1 rs13078854 Positive Severe 0.0 2.0 0.0000000000000000016

Papers

Paper
Trans-ancestry analysis reveals genetic and non-genetic associations with COVID-19 susceptibility and severity