Variant Detail

RSID rs9845542
HGVS NC_000003.12:g.46070377G>A
Chromosome 3
Start position46070377
Stop position46070377
Associated gene(s)CCR5
Mutation typeTagged SNP
Reference G
Alternative A
Associated allele A
Associated African Allele Frequency 0.5407
Consequence Upstream transcript variant
Other population frequencies linkALFA rs9845542

Variants

NamePaperDescription of ComparisonGeneRSIDAssociationDisease StatusMAFStatistical Odds RatioStatistical P-value
Cantalupo_rs9845542 Regulatory Noncoding and Predicted Pathogenic Coding Variants of CCR5 Predispose to Severe COVID-19 Hospitalised cases vs controls CCR5 rs9845542 positive Severe None 1.33 0.000000000000000000042

Papers

Paper
Regulatory Noncoding and Predicted Pathogenic Coding Variants of CCR5 Predispose to Severe COVID-19