Variant Detail

RSID rs12639314
HGVS NC_000003.12:g.46100012A>C
Chromosome 3
Start position46100012
Stop position46100012
Associated gene(s)CCR5
Mutation typeTagged SNP
Reference A
Alternative C
Associated allele C
Associated African Allele Frequency 0.5692
Consequence Intergenic
Other population frequencies linkALFA rs12639314

Variants

NamePaperDescription of ComparisonGeneRSIDAssociationDisease StatusMAFStatistical Odds RatioStatistical P-value
Cantalupo_rs12639314 Regulatory Noncoding and Predicted Pathogenic Coding Variants of CCR5 Predispose to Severe COVID-19 Hospitalised cases vs controls CCR5 rs12639314 positive Severe None 1.23 0.0000000071

Papers

Paper
Regulatory Noncoding and Predicted Pathogenic Coding Variants of CCR5 Predispose to Severe COVID-19