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COHG-SA

Variant Detail

RSID rs35951367
HGVS NC_000003.12:g.46076947T>C
Chromosome 3
Start position46076947
Stop position46076947
Associated gene(s)CCR5
Mutation typeTagged SNP
Reference T
Alternative C
Associated allele C
Associated African Allele Frequency 0.0978
Consequence Upstream transcript variant
Other population frequencies linkALFA rs35951367

Variants

NamePaperDescription of ComparisonGeneRSIDAssociationDisease StatusMAFStatistical Odds RatioStatistical P-value
Cantalupo_rs35951367 Regulatory Noncoding and Predicted Pathogenic Coding Variants of CCR5 Predispose to Severe COVID-19 Hospitalised cases vs controls CCR5 rs35951367 positive Severe None 1.32 0.00000000000000000032
Cantalupo_rs35951367 Regulatory Noncoding and Predicted Pathogenic Coding Variants of CCR5 Predispose to Severe COVID-19 Hospitalised cases vs controls replication study 1 CCR5 rs35951367 positive Severe None 1.41 0.00000379
Cantalupo_rs35951367 Regulatory Noncoding and Predicted Pathogenic Coding Variants of CCR5 Predispose to Severe COVID-19 Hospitalised cases vs control replication study 2 CCR5 rs35951367 positive Severe None 1.307 0.043

Papers

Paper
Regulatory Noncoding and Predicted Pathogenic Coding Variants of CCR5 Predispose to Severe COVID-19