COVID image

COHG-SA

Variant Detail

RSID rs10490770
HGVS NC_000003.12:g.45823240T>C
Chromosome 3
Start position45823240
Stop position45823240
Associated gene(s)LZTFL1, CXCR6, LOC107986083
Mutation typeTagged SNP
Reference T
Alternative C
Associated allele C
Associated African Allele Frequency 0.0123
Consequence Downstream transcript variant
Other population frequencies linkALFA rs10490770

Variants

NamePaperDescription of ComparisonGeneRSIDAssociationDisease StatusMAFStatistical Odds RatioStatistical P-value
COVID-19 HGI_10490770 Mapping the human genetic architecture of COVID-19 Hospitalised vs Controls LZTFL1, CXCR6, LOC107986083 rs10490770 Positive Severe 0.081 1.649 0.000000000000000000000000000000000000000000000000000000000000000000000000144
COVID-19 HGI_10490771 Mapping the human genetic architecture of COVID-19 Critical vs Controls LZTFL1, CXCR6, LOC107986083 rs10490770 Positive Critical 0.075 1.885 0.00000000000000000000000000000000000000000000000000000000000022

Papers

Paper
Mapping the human genetic architecture of COVID-19