Variant Detail

RSID rs77534576
HGVS NC_000017.11:g.49863303C>T
Chromosome 17
Start position49863303
Stop position49863303
Associated gene(s)KAT7, TAC4, DLX3, FLJ45513
Mutation typeTagged SNP
Reference C
Alternative T
Associated allele T
Associated African Allele Frequency 0.006
Consequence Intergenic
Other population frequencies linkALFA rs77534576

Variants

NamePaperDescription of ComparisonGeneRSIDAssociationDisease StatusMAFStatistical Odds RatioStatistical P-value
Namkoong_rs77534576 Japan COVID-19 Task Force: a nation-wide consortium to elucidate host genetics of COVID-19 pandemic in Japan Severe COVID-19 vs control TAC4, KAT7,DLX3, FLJ45513 rs77534576 Positive Severe 0.057 1.29 0.043
COVID-19 HGI_rs77534576 Mapping the human genetic architecture of COVID-19 Critical vs Controls KAT7, TAC4, DLX3, FLJ45513 rs77534576 Positive Critical 0.033 1.446 0.00000000437

Papers

Paper
Japan COVID-19 Task Force: a nation-wide consortium to elucidate host genetics of COVID-19 pandemic in Japan
Mapping the human genetic architecture of COVID-19