Variant Detail

RSID rs13050728
HGVS NC_000021.9:g.33242905T>C
Chromosome 21
Start position33242905
Stop position33242905
Associated gene(s)IFNAR2
Mutation typeTagged SNP
Reference T
Alternative A/C
Associated allele C/T
Associated African Allele Frequency 0.7868, 0.2132
Consequence Intronic
Other population frequencies linkALFA rs13050728

Variants

NamePaperDescription of ComparisonGeneRSIDAssociationDisease StatusMAFStatistical Odds RatioStatistical P-value
Namkoong_rs13050728 Japan COVID-19 Task Force: a nation-wide consortium to elucidate host genetics of COVID-19 pandemic in Japan COVID-19 vs control IFNAR2 rs13050728 Positive Susceptibility 0.573 1.1 0.015
Namkoong_rs13050728 Japan COVID-19 Task Force: a nation-wide consortium to elucidate host genetics of COVID-19 pandemic in Japan Young COVID-19 vs control IFNAR2 rs13050728 Positive Susceptibility 0.58 1.16 0.0024
Namkoong_rs13050728 Japan COVID-19 Task Force: a nation-wide consortium to elucidate host genetics of COVID-19 pandemic in Japan Young severe COVID-19 vs contr IFNAR2 rs13050728 Positive Severe 0.605 1.28 0.0039
COVID-19 HGI_rs13050728 Mapping the human genetic architecture of COVID-19 Hospitalised vs Controls IFNAR2 rs13050728 Negative Severe 0.651 0.861 0.0000000000000000000272
COVID-19 HGI_rs13050728 Mapping the human genetic architecture of COVID-19 Critical vs Controls IFNAR2 rs13050728 Negative Critical 0.652 0.819 0.000000000000000105
Pairo-Castineira_rs13050728 Genetic mechanisms of critical illness in Covid-19 Hospitalised vs Controls IFNAR2 rs13050728 Positive Severe None 1.2 0.0000000000051

Papers

Paper
Japan COVID-19 Task Force: a nation-wide consortium to elucidate host genetics of COVID-19 pandemic in Japan
Mapping the human genetic architecture of COVID-19
Genetic mechanisms of critical illness in Covid-19